• This tool takes aligned sequence files and reformats them to match the format used in the nomenclature reports.

  • The tool does not perform any kind of sequence alignment so unaligned files should not be used.

  • The individual sequences must align to the first sequences which will be used as the reference sequences in all outputs.

  • The tool automatically provides a protein translation and alignment.

The following file formats are accepted FASTA, CLUSTAL and text alignments.

  • Example FASTA File:


    >SEQUENCE 1
    GATAGATAGATA
    >SEQUENCE 2
    GTAGCTGTAGTG


     
  • Example CLUSTAL File:


    CLUSTAL
    SEQUENCE1 GATAGATAGATA
    SEQUENCE2 GTAGCTGTAGTG